Paola Favaretto

MathWorks

Aktiv seit 2015

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Beantwortet
How can icreate a local database and run a local blast operation using genome sequence?
Try this: >> blastformat('Inputdb', 'E:\genome1.fas'); You do not need an output variable (check the help for reference on...

mehr als 7 Jahre vor | 0

Beantwortet
how to import gene fasta file from NCBI using matlab 2016a
What version of Bioinformatics Toolbox are you using? I am able to download the sequence without issues. You can get the sequ...

mehr als 7 Jahre vor | 0

Beantwortet
how to import gene fasta file from NCBI using matlab 2016a
Are you sure it is a valid accession number? When I search the NCBI databases with the id you provided, I get 0 results.

mehr als 7 Jahre vor | 0

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Beantwortet
getgenbank function not working
Luuk is correct. After the transition to https at NCBI (effective November 2016), GETGENBANK, GETGENPEPT and other functions acc...

mehr als 7 Jahre vor | 0

Beantwortet
Getgenpept and getgenbank with https change in ncbi site
After the transition to https at NCBI (effective November 2016), GETGENBANK, GETGENPEPT and other functions accessing NCBI web s...

mehr als 7 Jahre vor | 0

Beantwortet
Why doesn't getncbidata work?
After the transition to https at NCBI (effective November 2016), GETGENBANK, GETGENPEPT and other functions accessing NCBI web s...

mehr als 7 Jahre vor | 0

Beantwortet
connect to NCBI database
You can use GETGENBANK, GETGENPEPT and other similar functions from the MATLAB Bioinformatics Toolbox to query NCBI databases.

mehr als 7 Jahre vor | 0

Beantwortet
Getgenpept and getgenbank with https change in ncbi site
Please contact MathWorks Tech Support. They will be able to provide you with a patch or a suitable workaround.

fast 8 Jahre vor | 0

Beantwortet
Matlab and IonTorrent?
Hi, 1) bamread requires that REFERENCE may either be a MATLAB string containing the name of the reference sequence, or a pos...

mehr als 8 Jahre vor | 1

Beantwortet
Error using the function gethmmprof
The Bioinformatics Toolbox version you are running (R2013a) supports only HMMER2.0 and HMMER3/b. The format of the current datab...

fast 9 Jahre vor | 1

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