VolumeCut

Version 6.3 (3,01 MB) von Luca Della Santina
Free-form cutter for volumetric images
0.0
(0)
150 Downloads
Aktualisiert 30. Jun 2021
Lizenz auf GitHub anzeigen

VolumeCut allows you to cut an image volume along surfaces of arbitrary shape.

Surfaces are defined by interpolation of sets of coordinates (X,Y,Z) provided by the user as a Matlab marix [n x 3].

Features of this app include:
+ Support for input image format: 8-bit 3D TIFF
+ Automatic voxel calibration when images are saved with ImageJ / FIJI
+ Custom offset can be defined for each surface
+ Custom smoothness level of interpolated surface
+ 4 different cut modes allowing to provide up to three cutting surfaces
+ Volume visualization using Matlab's 3D volume renderer
+ Save cut image volumes with black voxels in the cut region
+ Save masks used to cut the image stack
+ Mathematical operations on 3D masks: unite, intersect, exclude, subtract, invert, find edges, fill holes, close
+ Display and manipulate digital skeletons created with ImageJ's Simple Neurite Tracer

To download the latest version and for more information, visit: https://lucadellasantina.github.io/VolumeCut/

Zitieren als

Luca Della Santina (2024). VolumeCut (https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.3), GitHub. Abgerufen.

Kompatibilität der MATLAB-Version
Erstellt mit R2021a
Kompatibel mit R2021a und späteren Versionen
Plattform-Kompatibilität
Windows macOS Linux
Kategorien
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Versionen, die den GitHub-Standardzweig verwenden, können nicht heruntergeladen werden

Version Veröffentlicht Versionshinweise
6.3

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.3
6.2

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/6.2
6.1.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.1
6.0.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v6.0
5.2

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v5.2
5.1.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v5.1
5.0.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v5.0
4.9.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.9
4.8

Support for 2D binary masks
New Batch mode: Keep largest object
4.7.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.7
4.6

New Automation option to intensity histograms within masked volume
App now starts centered within the screen
During batch processing an interruptible progress bar informs of status
4.5

Automated tab allows batch measurements across mask images
4.4.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.4
4.3

Fixed bug causing missing interactivity with 3D plots
4.2.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v4.2
4.0

Digital skeleton management
3.3

"Close" and "Fill Holes" now iterate on each Z plane individually for better results than the old pure 3D functions.
3.2

New mask functionalities: Erode, Dilate, Close, Fill, Skeletonize, Ultimate erode, Median filtering
3.1

Mask info button shows mask statistics and overlap volume
3.0

2.3.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v2.3
2.2.0.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v2.2
2.1

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v2.1
2.0

See release notes for this release on GitHub: https://github.com/lucadellasantina/VolumeCut/releases/tag/v2.0
Um Probleme in diesem GitHub Add-On anzuzeigen oder zu melden, besuchen Sie das GitHub Repository.
Um Probleme in diesem GitHub Add-On anzuzeigen oder zu melden, besuchen Sie das GitHub Repository.