Neuron counting

Count the number of fluorescent cells (tagged with GFP) on noisy background fluorescence

2.2K Downloads

Updated 5 Mar 2010

View License

% Matlab GUI for neuron counting
% frequency filtering to remove background fluorescence
% Otsu's method for thresholding, with user interaction
% Original image courtesy of Lan Guo

Cite As

EMC_solver (2023). Neuron counting (https://www.mathworks.com/matlabcentral/fileexchange/26798-neuron-counting), MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R2008b
Compatible with any release
Platform Compatibility
Windows macOS Linux
Acknowledgements

Inspired by: Image overlay

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!
Version Published Release Notes
1.6.0.0

new GUI interface, tophat for preprocessing, optional outlining colors

1.5.0.0

include colormap for color image display

1.2.0.0

GUI version was made

1.0.0.0