This is my script:
function Langner_Ue1
load data1 P v;
Vmax3 = 4;
S2 = 40-P;
Km3 = 3;
k1 = 30;
P0 = [Vmax3, Km3, k1];
lsqcurvefit(@Michaelis_Menten_Substratinhibierung_2, P0, S2, v)
figure(2)
plot(S2,v,'r*')
hold on
plot(S2,vMMI2,'r')
hold on
legend('v über S', 'MMI2 über S')
end
function MMI2 = Michaelis_Menten_Substratinhibierung_2(Vmax3, S2, Km3, k1)
MMI2 = (Vmax3.*S2)./(Km3+S2+(S2.^2./k1));
end
Matrix dimensions must agree.
Error in Langner_Ue1>Michaelis_Menten_Substratinhibierung_2 (line 40) MMI2 = (Vmax3.*S2)./(Km3+S2+(S2.^2./k1));
Error in lsqcurvefit (line 213) initVals.F = feval(funfcn_x_xdata{3},xCurrent,XDATA,varargin{:});
Error in Langner_Ue1 (line 30) lsqcurvefit(@Michaelis_Menten_Substratinhibierung_2, P0, S2, v)
Caused by: Failure in initial objective function evaluation. LSQCURVEFIT cannot continue.
If I perform the function 'Michaelis_Menten_Substratinhibierung_2' directly in the command window there is no failure and verything works fine. Why do I get a failure when I try to run the script?

4 Kommentare

data1 P v???
Marcel Langner
Marcel Langner am 4 Nov. 2018
Bearbeitet: Marcel Langner am 4 Nov. 2018
Im new to Matlab. I dont understand your question?
I tried to load the variables P and v from the dataset data1.mat
madhan ravi
madhan ravi am 4 Nov. 2018
upload your file by clicking the paper clip button
Marcel Langner
Marcel Langner am 4 Nov. 2018
Uploaded file

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 Akzeptierte Antwort

Bruno Luong
Bruno Luong am 4 Nov. 2018
Bearbeitet: Bruno Luong am 4 Nov. 2018

1 Stimme

Try this:
load data1 P v;
Vmax3 = 4;
S2 = 40-P;
Km3 = 3;
k1 = 30;
P0 = [Vmax3, Km3, k1];
P = lsqcurvefit(@Michaelis_Menten_Substratinhibierung_2, P0, S2, v);
MMI2 = Michaelis_Menten_Substratinhibierung_2(P, S2);
figure(2)
plot(S2,v,'r*')
hold on
plot(S2,vMMI2,'r')
hold on
legend('v über S', 'MMI2 über S')
end
function MMI2 = Michaelis_Menten_Substratinhibierung_2(P, S2)
Vmax3 = P(1);
Km3 = P(2);
k1 = P(3);
MMI2 = (Vmax3.*S2)./(Km3+S2+(S2.^2./k1));
end

3 Kommentare

Marcel Langner
Marcel Langner am 4 Nov. 2018
Thanks a lot. It worked. But i dont understand it totally. Why did you define P? Its a given Variable I got from the data set. Isnt it overwritten, when i define it again?
In any optimization function you have to provide the parameters as a vector, up to you to split the vector in a meaningful way.
I just guess because you supply
P0 = [Vmax3, Km3, k1];
So the order of parameters must be as written in Michaelis_Menten_Substratinhibierung_2.
Marcel Langner
Marcel Langner am 4 Nov. 2018
Nice thanks a lot!

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