Info
Diese Frage ist geschlossen. Öffnen Sie sie erneut, um sie zu bearbeiten oder zu beantworten.
can some one help me prepare the data in such a format so i can run the further code.
1 Ansicht (letzte 30 Tage)
Ältere Kommentare anzeigen
i have downloaded a source code want to intimate the same result. the data is actually in .tsv format i have converted in txt n uploaded. i have to read this file and after reading file, i am suppose to run below mentioned code to create the biadjacency matrix. thanks in advance
bi = zeros(2901,801);
for i=1:length(matador.num)
x=find(strcmp(proteins,matador.txt(i,4))==1);
y=find(chemicals==matador.num(i,1));
bi(x,y)= 1;
end
1 Kommentar
Antworten (1)
Walter Roberson
am 18 Dez. 2017
mattab = readtable('matador.txt');
[uprot, ~, protidx] = unique(mattab.protein_name);
[uchem, ~, chemidx] = unique(mattab.chemical_id);
bi = accumarray([protidx, chemidx], 1);
spy(bi);
No loop required.
This might not give the table in the same order as your proteins and chemicals order. The order that will be used is alphanumeric sort order for protein name, and increasing numeric for chemical ID.
Diese Frage ist geschlossen.
Siehe auch
Community Treasure Hunt
Find the treasures in MATLAB Central and discover how the community can help you!
Start Hunting!