How cann i get images from HDF5 data?

i have a HDF5 Data with following structure:

>> h5disp('NT_D1_3_120516_00004_data_000001.h5')

HDF5 NT_D1_3_120516_00004_data_000001.h5

Group '/'

Group '/entry'

Attributes:

 'NX_class':  'NXentry'

 Group '/entry/data' 

Attributes:

 'NX_class':  'NXdata'

Dataset 'data' 

Size:  2070x2167x77

 MaxSize:  2070x2167xInf

Datatype:   H5T_STD_U32LE (uint32)

 ChunkSize:  2070x2167x1

 Filters:  unrecognized filter (HDF5 lz4 filter; see http://www.hdfgroup.org/services/contributions.html)

 FillValue:  0

Attributes:

 'image_nr_low':  1

 'image_nr_high':  77

There are 77 images withi 2070x2167points. i can read the data with MatLab:

>> data = h5read('NT_D1_3_120516_00004_data_000001.h5','/entry/data/data')

and get a long list of numbers: see attachment.

now i need 77 images.

How can i get them?

[Stefan Stanko]

Hi, I am experiencing the same problem (but cannot even get the numbers because of the lack of a HDF5 lz4 filter). Did you manage to figure out a solution?

Answer 1

[Vishwas]

I think your question might have an answer here: https://www.mathworks.com/matlabcentral/answers/93316-is-it-possible-to-open-hdf5-h5-images-in-matlab

There is no image ingestion tool available for hdf5 images.