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Nonlinear regression with categorical predictor?

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wesleynotwise
wesleynotwise am 24 Mai 2017
Kommentiert: wesleynotwise am 25 Mai 2017
Suppose I have the following equation
y = (k1|x1)*(k2*x2)*(k3*x3^(1/k4))
where k1 is a coefficient depending on variable x1. Both k2 and k3 are also coefficients, and k4 is a power term, which all the ks are not known to me.
x1 is categorical, say adult male, young male, adult female and young female, and x2 and x3 are numeric, say x2 = weight 75kg, 62kg, 89kg... and x3 = height 180 cm, 172 cm, 170 cm...
Anyone knows how to perform a regression for such a combination of data to find all the ks? and eventually the model has two values for k1, for example: if x1 = male, k1 = 2.5; if x1 = female, k1 = 1.5.
  2 Kommentare
the cyclist
the cyclist am 24 Mai 2017
I haven't thought about how to model this whole thing, but the term
k1*x1
is problematic, I think, when x1 is categorical. For example, what does "6 times male" mean?
Since you didn't mention explicitly, I assume that x2 and x3 are interval data?
wesleynotwise
wesleynotwise am 24 Mai 2017
Bearbeitet: wesleynotwise am 24 Mai 2017
Ah. Good question. Let me modify my the first term and my question. x2 and x3 are interval data, for example, weight and height in this case.

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Michelangelo Ricciulli
Michelangelo Ricciulli am 24 Mai 2017
Ok, a very simple way to do it is the following.
You can use the function fminunc, that finds the minimum value of something. What is this something? You want your model to predict very well the y value, so the mean square error between y and the model is what you want to minimize. Let's define this function as errFunc depending on a vector param:
errFunc=@(param) mean((y - k1(x1)*(param(1)*x2)*(param(2)*x3.^(1/param(3)))).^2);
This works if you already have in your environment the data x1, x2,x3,y and also the function k1 that returns the right coefficient based on k1.
Then, you just need to call fminunc with the function you just created and a guess of the 3 values you are searching (let's just put random numbers as guess)
fminunc(errFunc,randn(3,1))
this will output the value of param you are searching for.
Probably you'll need to add another another coefficient, let's call it param(4), that is summed to your model to better fit the data.
  12 Kommentare
Michelangelo Ricciulli
Michelangelo Ricciulli am 25 Mai 2017
Check the other answer, it makes a very good point. Sorry if I didn't notice that before
wesleynotwise
wesleynotwise am 25 Mai 2017
I tried your suggestion for a small sample size, and... IT WORKS!!! You've brighten up my day.... Well, I receieved the following error message though, I assume that was due to my data size, or the variables I used, which should be easy to resolve.
Warning: The Jacobian at the solution is ill-conditioned, and some model parameters may not be estimated well
(they are not identifiable). Use caution in making predictions.
> In nlinfit (line 376)
In NonLinearModel/fitter (line 1123)
In classreg.regr.FitObject/doFit (line 94)
In NonLinearModel.fit (line 1430)
In fitnlm (line 94)

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Weitere Antworten (1)

Ilya
Ilya am 25 Mai 2017
Unless I misunderstood your dot notation, the problem is ill-defined. It has an infinite number of solutions. Rewrite it in this form:
y = ((k1|x1)*k2*k3) * x2*x3^(1/k4)
Observe that you can only fit for ((k1|x1)*k2*k3), but not for separate coefficients k1, k2 and k3.
Generally, the best way to handle multiplicative models is to turn them into additive models by taking the log of both sides. If you do that, you get
q = (c1|x1) + c4*z3
where
q = log(y) - log(x2)
c1 = log(k123|x1)
k123|x1 = (k1|x1)*k2*k3
c4 = 1/k4
z3 = log(x3)
This model can be easily fitted by fitlme. (If you have only two levels in x1, you can easily get away without fitlme.) The formula would be something like 'q ~ (1|x1) + z3'.
  3 Kommentare
Ilya
Ilya am 25 Mai 2017
You can't separate k1, k2 and k3. The form of your problem does not allow that. You can feed your problem into some minimizer and get a numeric answer (likely with some warnings about ill-conditioning). But the numeric answer such as {k1a,k1b,k2,k3} (a and b are used to enumerate categorical levels) is not in any way different from {k1a,k1b,k2/2,2*k3} or {2*k1a,2*k1b,k2/2,k3} etc. If you run fitlme, you will get K values for the intercept c1=log(k1*k2*k3), where K is the number of categorical levels in x1, plus one linear coefficient for c4. That's all you can do with this problem.
wesleynotwise
wesleynotwise am 25 Mai 2017
Ah. If that's the case, the equation can at most be re-written to this
log (y) = (c1|x1) + c4*log(x3) + log (x2)
This means once one feeds all the variable data of x1, x2 and x3, one needs to inverse the log of y in order to obtain real y value?

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