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How can I replace a pair of coordinates (x;y) in a table by values from a list of reference coordinates?

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Hi,
I need your help to create a short script.
I have two series of data in Excel with pixel coordinate one for x and one for y, in two columns, for all existing spots counted in every location of a sample.
I aslo have some reference values selected for every unique pair of coordinates also (X;Z) in two columns, plus two extra columns for the corresponding absolute position on the sample (Abs_Len) and the relative position (Rel_Len).
I would like to create a new matrix of two columns that replace every pair of x;y by the corresponding Abs_Len and Rel_Len according to the reference columns X;Y.
Thansk for your help

Akzeptierte Antwort

Antoni Garcia-Herreros
Antoni Garcia-Herreros am 12 Apr. 2023
Hello Mathieu,
You can try something like this:
However, I did not find any X, Y pair of values present in both len and IHC.
clear all
close all
len = readmatrix('SAMPL01_R.xlsx','Sheet','len');
IHC = readmatrix('SAMPL01_R.xlsx','Sheet','IHC');
OHC = readmatrix('SAMPL01_R.xlsx','Sheet','OHC');
for i=1:size(len,1)
x=len(i,3); % X value in len
y=len(i,4); % Y value in len
fIHC=find(ismember(IHC(:,3:4),[x,y],'rows')); % Find the indices where IHC is equal to X and Y
fOHC=find(ismember(OHC(:,3:4),[x,y],'rows')); % Find the indices where O is equal to X and Y
if ~isempty(fIHC)
for j=1:length(fIHC) % Loop through IHC indices
IHC(fIHC(j),5:6)=len(i,5:6); % Add len_mume and len_rel to IHC
end
end
if ~isempty(fOHC)
for j=1:length(fOHC) % Loop through OHC indices
OHC(fOHC(j),5:6)=len(i,5:6); % Add len_mume and len_rel to OHC
end
end
end
OHCMat=OHC(OHC(:,5)>0,:); % Create the matrix with only the matching values
IHCMat=IHC(IHC(:,5)>0,:);
Let me know if that helps,
  2 Kommentare
Mathieu Petremann
Mathieu Petremann am 12 Apr. 2023
Hello Antoni,
Thanks a lot. Indeed the file I sent was not the best exemple.
But I will try the script tomorrow with other files.
That should still help me a lot!
I will let you know.
Best,
Mathieu
Mathieu Petremann
Mathieu Petremann am 13 Apr. 2023
Hello Antoni,
I tested it with another file and it works perfectly.
Thanks a lot!
Mathieu

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Mathieu Petremann
Mathieu Petremann am 12 Apr. 2023
Hi,
Here is the file.
The len sheet is my reference table and I want to attribute the refence len_mume and len_rel to the IHC and OHC sheets for the corresponding coordinates.
Thanks!

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