How to calculate the covariance and correlation among variables and principal components.
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When i was doing the PCA analysis, i wanna calculate the covariance and correlations among variables and principal components to see which variables are important based on this correlation matrix?
I don't know how to do that.
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Amish
am 8 Okt. 2024
Hi Huan,
I see that you want to perform a PCA analysis and calculate the covariance and correlations among principal components.
This can be performed using existing functionalities in-built in the MATLAB. Here is a generic example (using a random sample set) highlighting how you can do the same:
% Example Data
X = randn(100, 5);
X_standardized = zscore(X);
% PCA
[coeff, score, latent, ~, explained] = pca(X_standardized);
% Covariance and Correlation with PCs
covMatrix = cov(X_standardized);
corrMatrix = corr(X_standardized);
correlationWithPCs = coeff .* sqrt(latent)';
disp('Covariance Matrix:');
disp(covMatrix);
disp('Correlation Matrix:');
disp(corrMatrix);
disp('Correlation with Principal Components:');
disp(correlationWithPCs);
The documentation for the functions mentioned in the above sample can be referred to using the 'doc' command or through the following links:
Hope this helps!
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