Dr. Soumya Banerjee
Harvard University
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https://sites.google.com/site/neelsoumya/ Professional Interests: Biocomputing, machine learning, bioinformatics, complex systems, mathematical modelling, big data, computational biology, biologically inspired computing, complex systems
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Feeds
Gesendet
Samples from gamma and Wishart
Test and draw samples from a gamma distribution and a Wishart distribution
mehr als 7 Jahre vor | 30 Downloads |
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Generic function to perform logistic regression using elastic net regularization
Generic function to perform logistic regression using elastic net regularization
mehr als 8 Jahre vor | 111 Downloads |
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Example MATLAB script to plot ROC curve for different classification algorithms
Example MATLAB script to plot ROC curve and compute AUC for 4 different classification algorithms
mehr als 8 Jahre vor | 1057 Downloads |
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A generic function that uses a Generalized Linear Model (GLM) with factors
A generic function that uses a Generalized Linear Model (GLM) with factors
mehr als 8 Jahre vor | 25 Downloads |
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Function to compute Fisher's p-value for meta-analysis
Function to compute Fisher's p-value for meta-analysis.
mehr als 8 Jahre vor | 287 Downloads |
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Generic function and example code for using neural networks
Generic function and example code for using neural networks for prediction.
etwa 9 Jahre vor | 676 Downloads |
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Generic example code and generic function for random forests
example code and generic function for random forests (checks out of bag errors and leaf size)
etwa 9 Jahre vor | 782 Downloads |
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Simple example and generic function for SVM binary classifier for general matrix
Simple generic function that takes two labelled classes and trains SVM classifier (general matrix).
etwa 9 Jahre vor | 157 Downloads |
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Simple example and generic function for SVM binary classifier
Simple generic function that takes two labelled classes and trains SVM classifier.
etwa 9 Jahre vor | 5126 Downloads |
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Simple example code and generic function for random forests
Simple example code and generic function for random forests (checks out of bag errors)
fast 10 Jahre vor | 3344 Downloads |
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Function to plot co-ordinates from a file on a map
Code to load co-ordinate data from a file and call function to plot co-ordinates on a map.
mehr als 10 Jahre vor | 72 Downloads |
Gesendet
Generic function and example code for performing LASSO on GLM
Generic function and example code for performing LASSO on GLM and using it for prediction
etwa 11 Jahre vor | 232 Downloads |
Gesendet
Generic function for LASSO on logistic regression
Generic function and example code for LASSO on logistic regression.
etwa 11 Jahre vor | 311 Downloads |
Gesendet
Simple example and generic function to perform PCA
Simple example and generic function to perform PCA(principle components analysis)
etwa 11 Jahre vor | 607 Downloads |
Gesendet
Example code and generic function to perform LASSO on GLM
Generic function to perform LASSO on generalized linear model (GLM).
etwa 11 Jahre vor | 188 Downloads |
Gesendet
Function to perform Bayesian LASSO
Function to perform Bayesian LASSO (least absolute shrinkage and selection operator)
mehr als 11 Jahre vor | 550 Downloads |
Gesendet
Simple MATLAB example code and generic function to perform LASSO
Simple MATLAB example code and generic function to perform LASSO
mehr als 11 Jahre vor | 1160 Downloads |
Gesendet
Bash script to compile MATLAB code in each directory
Iterative matlab compiler: this has Bash scripts to compile MATLAB code in each directory
mehr als 11 Jahre vor | 157 Downloads |
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Scripts to run MATLAB on cluster using bsub
This is a set of scripts to run MATLAB in batch mode on the cluster using bsub
mehr als 11 Jahre vor | 422 Downloads |
Gesendet
Simple example and generic function for kmeans clustering
Simple generic function and example to perform kmeans clustering
mehr als 11 Jahre vor | 1251 Downloads |
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Bayesian Linear Regression
This is a set of MATLAB functions to do Bayesian linear regression
fast 12 Jahre vor | 3271 Downloads |
Gesendet
Graphical User Interface for Solving Ordinary Differential Equations for In-Vitro Infection
A graphical user interface to solve a set of ordinary differential equations (in-vitro infection)
etwa 12 Jahre vor | 671 Downloads |
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Wilcoxon rank-sum test and box plots for genes/compounds etc in healthy vs. disease
Does a Wilcoxon rank-sum test and creates box plot for genes etc in healthy vs. disease individuals
etwa 12 Jahre vor | 697 Downloads |
Gesendet
t-test and box plots for genes/compounds etc in healthy vs. disease
Does a t-test and creates box plots for genes/compounds in healthy vs. disease individuals
etwa 12 Jahre vor | 513 Downloads |
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healthy_disease_boxplot.zip
Box plots of measured quantity in healthy vs. disease in two cohorts
etwa 12 Jahre vor | 417 Downloads |
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Linear regression for multiple category data with different slopes for each
The function does OLS and RMA regression on data that is categorized into two different categories
etwa 12 Jahre vor | 821 Downloads |
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Linear regression with statistics for multiple category data
This function does linear regression with statistics for multiple category data (OLS and RMA)
fast 14 Jahre vor | 36055 Downloads |
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A Graphical User Interface for Solving Delay Differential Equations and doing Local Search
A GUI for solving a set of delay differential equations (DDEs) and local search for best solutions
etwa 14 Jahre vor | 929 Downloads |
Gesendet
Graphical User Interface for Solving Ordinary Differential Equations
A Graphical User Interface for Solving Ordinary Differential Equations (Immune Response Model)
mehr als 14 Jahre vor | 983 Downloads |
Gesendet
Linear regression on log transformed data
A function that takes two column vectors and does linear regression on the data
mehr als 14 Jahre vor | 776 Downloads |
