How can I find distance between two sets of genomic position data
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I have two sets of data, looking like that:
chr1 7777777 chr1 55555555
chr2 8888888 chr1 45555555
chr2 88444444
chr2 44222222
and i need to find whether there is anything less than 1000 away from chr1 77777777 point, in a second dataset and then repeat it for each point from fist dataset
But i am not sure how to find it since my datasets of different size.
Anyone can help, or suggest the other way to compare genomic position in matlab?
Thank you a lot.
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